STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_000565Protein. (566 aa)    
Predicted Functional Partners:
LENED_011802
Tryptophan synthase.
     
 0.710
LENED_003019
DUF1992 domain-containing protein.
   
 0.670
LENED_006328
Uncharacterized protein.
   
 0.670
LENED_010870
S-adenosyl-L-methionine-dependent methyltransferase.
   
 0.670
LENED_002711
Phosphatidyl synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.642
LENED_007399
HAD hydrolase.
     
 0.642
BNA5
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
  
 
 0.630
LENED_012509
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.625
LENED_012664
Ubiquinone menaquinone biosynthesis methyltransferase.
   
 0.603
LENED_012190
Ferredoxin.
     
 0.575
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.