STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_000738HMG box domain-containing protein. (732 aa)    
Predicted Functional Partners:
LENED_007225
Protein disulfide-isomerase.
    
   0.693
LENED_003554
Uncharacterized protein.
    
 0.574
LENED_002976
Uncharacterized protein.
    
   0.552
LENED_002975
Ubiquitin-conjugating enzyme 9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.552
LENED_003274
Armadillo beta-catenin plakoglobin.
    
  0.533
LENED_007332
Armadillo beta-catenin plakoglobin.
    
  0.533
LENED_012698
Armadillo beta-catenin plakoglobin.
    
  0.533
LENED_007412
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.511
LENED_007411
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.511
LENED_009582
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
   0.506
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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