STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_00131660s ribosomal protein l25. (201 aa)    
Predicted Functional Partners:
LENED_011775
Heat shock protein 70.
   
 0.861
LENED_003972
Heat-shock protein 90.
   
 0.815
LENED_003971
Uncharacterized protein.
   
 0.815
LENED_006130
Heat shock protein; Belongs to the heat shock protein 70 family.
   
 0.799
LENED_003354
Heat shock protein 70; Belongs to the heat shock protein 70 family.
   
 0.798
LENED_007149
Heat shock protein Hsp90.
   
 0.796
LENED_001750
Protein.
   
 0.769
LENED_003217
Hsp70-like protein.
   
 0.769
LENED_004630
Uncharacterized protein.
   
 0.769
LENED_007824
Actin-like ATPase domain-containing protein.
   
 0.769
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.