STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_001820Cofactor-independent phosphoglycerate mutase. (524 aa)    
Predicted Functional Partners:
LENED_003585
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.986
LENED_005486
Phosphopyruvate hydratase.
  
 0.980
LENED_008551
Pre-mrna polyadenylation factor fip1.
   
 0.978
LENED_000341
Pre-mrna cleavage factor cfi subunit.
    
 0.977
LENED_008404
Cleavage and polyadenylation specific protein.
   
 0.975
LENED_011199
Triosephosphate isomerase.
  
 0.958
LENED_012869
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.955
LENED_007192
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
   
 
 0.940
LENED_004102
Poly polymerase pla1.
    
 0.937
LENED_010894
Duf455 domain-containing protein.
    
 0.937
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.