STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_00225860s ribosomal protein l2. (370 aa)    
Predicted Functional Partners:
LENED_000333
60s ribosomal protein l6.
  
 0.999
LENED_000342
60S ribosomal protein L9.
  
 0.999
LENED_001436
60S ribosomal protein L17 L23; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
LENED_001749
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
LENED_002087
60S ribosomal protein L33.
   
 0.999
LENED_002546
60S ribosomal protein L24.
   
 0.999
LENED_002619
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.999
LENED_002809
Ribosomal protein L24.
  
 0.999
LENED_003322
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.999
LENED_003385
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.