STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_002224Uncharacterized protein. (556 aa)    
Predicted Functional Partners:
LENED_000375
Meiotically up-regulated 71 protein.
    
 0.972
LENED_002619
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.926
LENED_005339
40s ribosomal protein s11; Belongs to the universal ribosomal protein uS17 family.
  
 0.926
LENED_005435
40s ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
  
 0.926
LENED_007174
Ribosomal protein l35.
  
 0.926
LENED_009092
60S ribosomal protein L5.
  
 0.926
LENED_001436
60S ribosomal protein L17 L23; Belongs to the universal ribosomal protein uL22 family.
  
 0.925
LENED_002752
Mitochondrial 50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.925
LENED_003803
60s ribosomal protein l2.
  
 0.925
LENED_005276
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.925
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.