STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_002483Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. (842 aa)    
Predicted Functional Partners:
LENED_011061
Acetolactate synthase.
  
 
 0.976
LENED_001392
Dihydroxy-acid and 6-phosphogluconate dehydratase.
  
 0.974
LENED_003504
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 
  
 0.919
LENED_006104
Dihydroxy-acid dehydratase.
  
 0.890
LENED_008601
UDP-glucose 6-dehydrogenase.
  
 
 0.713
LENED_010527
Heat shock HSP70 protein; Belongs to the heat shock protein 70 family.
   
  
 0.658
LENED_002613
Uba ts-n domain protein.
    
 0.642
LENED_000121
F-box domain-containing protein.
    
 0.623
LENED_000275
Uncharacterized protein.
    
 0.623
LENED_000682
Uncharacterized protein.
    
 0.623
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.