STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_002841Actin-like ATPase domain-containing protein. (553 aa)    
Predicted Functional Partners:
LENED_007960
Ribulose-5-phosphate 3-epimerase.
    
 0.953
LENED_000340
Xylitol dehydrogenase.
  
 
 0.927
LENED_001165
NADP+-dependent D-mannitol dehydrogenase.
  
 
 0.925
LENED_005015
D-xylulose kinase.
  
  
 
0.910
LENED_009645
Class ii aldolase adducin domain protein.
  
 
 0.848
LENED_011735
Class ii aldolase adducin domain protein.
  
 
 0.848
LENED_001694
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.830
LENED_003116
Mannitol-1-phosphate 5-dehydrogenase.
    
 0.803
LENED_011465
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.798
LENED_002515
Ribose-5-phosphate isomerase.
    
 0.797
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.