STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_003231Kinase-like protein. (975 aa)    
Predicted Functional Partners:
LENED_007143
Ubiquitin conjugating enzyme family protein.
   
 0.818
LENED_000171
Zz type zinc finger domain-containing protein.
    
 0.795
LENED_010297
Regulator of G protein signaling superfamily.
    
 0.767
LENED_002351
14-3-3 protein; Belongs to the 14-3-3 family.
   
 0.745
LENED_007128
14-3-3 protein; Belongs to the 14-3-3 family.
   
 0.745
LENED_001375
Hsp90 co-chaperone cdc37.
    
  0.738
LENED_003582
Rho guanine nucleotide exchange factor.
    
  0.701
LENED_007758
Hypothetical response regulator receiver protein.
    
 0.689
LENED_003972
Heat-shock protein 90.
    
 0.677
LENED_003971
Uncharacterized protein.
    
 0.677
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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