STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_003196Malate dehydrogenase. (334 aa)    
Predicted Functional Partners:
LENED_010473
Citrate synthase; Belongs to the citrate synthase family.
  
 0.989
LENED_012422
Peroxysomal citrate synthase.
  
 0.989
LENED_012826
Citrate synthase; Belongs to the citrate synthase family.
  
 0.989
LENED_008027
Aspartate aminotransferase.
   
 0.984
LENED_008562
Aspartate aminotransferase.
   
 0.972
LENED_005754
Atp-citrate synthase.
  
 0.971
LENED_012225
Pyruvate carboxylase.
  
 0.960
LENED_007890
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.957
LENED_006608
Fumarate hydratase.
  
 0.956
LENED_011585
Fumarate hydratase.
  
 0.956
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.