STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_003813Acyl-dehydrogenase. (805 aa)    
Predicted Functional Partners:
LENED_003629
Delta 5 fatty acid desaturase.
     
 0.709
LENED_010920
Molybdopterin binding oxidoreductase.
     
 0.684
LENED_011973
Sulfite oxidase.
     
 0.684
LENED_002814
Polyketide synthase.
    
 0.604
LENED_003642
Protein.
    
 0.604
LENED_005267
Polyketide synthase.
    
 0.604
LENED_005266
Polyketide synthase.
    
 0.604
LENED_005678
Protein.
    
 0.604
LENED_007366
Polyketide synthase.
    
 0.604
LENED_012480
Uncharacterized protein.
    
 0.604
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.