STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_003867Glycoside hydrolase family 13 protein. (480 aa)    
Predicted Functional Partners:
LENED_000562
Glycoside hydrolase family 13 protein.
  
 
 0.890
LENED_002987
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.850
LENED_003902
Glycoside hydrolase family 15 protein.
    
 0.779
LENED_007455
Glucoamylase.
    
 0.779
LENED_007456
Glucoamylase.
    
 0.779
LENED_005239
General amidase.
    
 0.767
LENED_005718
Glycoside hydrolase family 31 protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.767
LENED_006140
APC amino acid permease.
    
 0.767
LENED_006139
APC amino acid permease.
    
 0.767
LENED_008161
Glycoside hydrolase family 31 protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.767
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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