STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_003894Heme oxygenase. (309 aa)    
Predicted Functional Partners:
LENED_003178
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.944
LENED_004326
NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
    
 
 0.868
LENED_012190
Ferredoxin.
    
 
 0.739
LENED_001340
Hsc70 cochaperone.
     
 0.627
LENED_005138
DNA helicase; Belongs to the MCM family.
 
   
 0.614
LENED_008515
TPR_REGION domain-containing protein.
     
 0.572
LENED_000726
Cytochrome p450.
    
 
 0.555
LENED_005966
Arabinanase levansucrase invertase; Belongs to the glycosyl hydrolase 43 family.
    
 
 0.555
LENED_010388
Galactan-beta-galactosidase; Belongs to the glycosyl hydrolase 43 family.
    
 
 0.555
LENED_011603
Uncharacterized protein.
    
 
 0.555
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.