STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_004246Lipid metabolism-related. (378 aa)    
Predicted Functional Partners:
LENED_002362
Phospholipase carboxylesterase.
     
 0.699
LENED_008350
1-acylglycerol-3-phosphate O.
    
  0.699
LENED_000617
Serine hydrolase.
   
 0.624
LENED_003147
NADH-ubiquinone oxidoreductase kDa subunit.
   
 0.624
LENED_009671
Vacuolar protein sorting protein vps66.
    
  0.599
LENED_011496
Lysocardiolipin acyltransferase.
    
  0.599
LENED_005014
Phospholipase carboxylesterase.
     
 0.591
LENED_011366
Uncharacterized protein.
    
  0.535
LENED_001168
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.529
LENED_002106
Arrestin-related trafficking adapter 3.
    
  0.526
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.