STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_004344Heme-responsive zinc finger transcription factor HAP1. (337 aa)    
Predicted Functional Partners:
LENED_003504
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 0.888
LENED_005036
Conserved oligomeric golgi complex subunit 5-like.
  
 
 0.796
LENED_005037
Conserved oligomeric golgi complex subunit 5-like.
  
 
 0.796
LENED_007890
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.787
LENED_000507
2-isopropylmalate synthase.
  
 0.780
LENED_001731
2-isopropylmalate synthase.
  
 0.780
LENED_003602
Homocitrate synthase.
  
 0.780
LENED_007574
Aldolase.
  
 0.770
LENED_011061
Acetolactate synthase.
  
 0.720
LENED_005591
Thiamin diphosphate-binding protein.
  
 0.705
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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