STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_004838Glycoside hydrolase. (1264 aa)    
Predicted Functional Partners:
LENED_003358
Acyl-N-acyltransferase.
   
 0.908
LENED_008773
Acetyltransferase protein.
   
 0.908
LENED_004406
Protein.
    
 0.900
LENED_011323
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.882
LENED_012841
Sm-like ribonucleo protein.
    
 0.850
LENED_000491
N-acetyltransferase complex catalytic subunit Ard1.
    
 0.473
LENED_001155
Acyl-N-acyltransferase.
    
 0.473
LENED_004798
N-acetyltransferase complex catalytic subunit Ard1.
    
 0.473
LENED_004799
N-acetyltransferase complex catalytic subunit Ard1.
    
 0.473
LENED_002458
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the small GTPase superfamily. Arf family.
     
 0.433
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.