STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_004859Phosphosulfolactate synthase. (200 aa)    
Predicted Functional Partners:
LENED_006197
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 0.977
LENED_007164
Iron-containing alcohol dehydrogenase 1.
    
 0.943
LENED_007275
Alcohol dehydrogenase iv.
    
 0.943
LENED_009160
DAGAT-domain-containing protein.
 
 
 
 0.803
LENED_001022
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.765
LENED_010584
15-hydroxyprostaglandin dehydrogenase (Nad(+)); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.748
LENED_012190
Ferredoxin.
    
 0.714
LENED_007649
Pyruvate decarboxylase.
     
 0.706
LENED_012542
Pyruvate decarboxylase.
     
 0.706
LENED_007993
Delta 8-sphingoloid desaturase protein.
    
 0.689
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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