STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_004989Pleiotropic drug resistance abc transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1474 aa)    
Predicted Functional Partners:
LENED_000731
Pleiotropic drug resistance ABC transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.879
LENED_001919
Serine threonine protein phosphatase pp2a-associated protein.
    
 0.622
LENED_005065
ATP synthase subunit gamma.
   
   0.588
LENED_002349
Jumonji superfamily protein.
    
 
 0.573
LENED_010958
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.573
LENED_004301
Multidrug resistance protein cdr1; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.566
LENED_000562
Glycoside hydrolase family 13 protein.
   
 
  0.563
LENED_004250
Ctg1 protein.
    
 
 0.563
LENED_004258
Serine/threonine-protein phosphatase.
    
 
 0.563
LENED_004249
Ctg1 protein.
    
 
 0.563
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.