STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_005078Aquaporin 4; Belongs to the MIP/aquaporin (TC 1.A.8) family. (381 aa)    
Predicted Functional Partners:
LENED_000602
Camp-dependent protein kinase regulatory subunit.
   
 0.901
LENED_008894
Exosome component 8.
    
   0.821
LENED_008908
Clathrin assembly protein ap47; Belongs to the adaptor complexes medium subunit family.
    
 
 0.813
LENED_001694
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.795
LENED_003796
Pentulose kinase.
  
 0.788
LENED_007865
Glycerol kinase; Belongs to the FGGY kinase family.
  
 0.788
LENED_009303
Glycerol kinase; Belongs to the FGGY kinase family.
  
 0.788
LENED_009302
Glycerol kinase; Belongs to the FGGY kinase family.
  
 0.788
LENED_002680
26S proteasome regulatory complex ATPase RPT6; Belongs to the AAA ATPase family.
  
 0.779
LENED_002679
26S proteasome regulatory ATPase RPT6; Belongs to the AAA ATPase family.
  
 0.779
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.