STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_0054423-ketoacyl-thiolase. (652 aa)    
Predicted Functional Partners:
LENED_005606
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 0.981
LENED_004020
Peroxisomal-enoyl-isomerase.
  
 0.976
LENED_007967
Acyl-binding protein.
  
 0.976
LENED_000719
3-hydroxybutyryl-dehydrogenase.
  
 0.925
LENED_000720
3-hydroxybutyryl-dehydrogenase.
  
 0.925
LENED_004593
Integral membrane protein.
  
 0.925
LENED_002016
WD40 repeat-like protein.
    
 0.922
LENED_004398
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.916
LENED_006394
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.899
LENED_007392
Enoyl-hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.886
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.