STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_006674Glycoside hydrolase family 61 protein. (546 aa)    
Predicted Functional Partners:
LENED_001862
Peroxin19 pex19p.
    
 0.681
LENED_001861
Peroxin19 pex19p.
    
 0.681
LENED_003323
Peroxisomal membrane protein.
     
 0.644
LENED_011322
Peroxisome assembly protein per8 (Peroxin-10).
     
 0.638
LENED_004020
Peroxisomal-enoyl-isomerase.
   
 
 0.617
LENED_007967
Acyl-binding protein.
   
 
 0.610
LENED_003277
Phosphoric monoester hydrolase.
     
 0.609
LENED_008005
Peroxisomal membrane protein PEX16.
     
 0.597
LENED_006049
Peroxisomal targeting signal 1 receptor.
     
 0.592
LENED_006100
TPR-like protein.
     
 0.592
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.