STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_006846Transcriptional corepressor. (1030 aa)    
Predicted Functional Partners:
LENED_008010
Kinesin-domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.917
LENED_001455
General transcriptional repressor.
    
 0.914
LENED_000724
Uncharacterized protein.
    
 0.871
LENED_005056
BTB domain-containing protein.
    
 0.813
LENED_009221
BTB domain-containing protein.
    
 0.813
LENED_004965
Histone-like.
    
 0.793
LENED_006546
Histone H3; Belongs to the histone H3 family.
    
 0.793
LENED_006264
WD40 repeat-like protein.
    
 0.785
LENED_011527
WD40 repeat-containing protein.
    
 0.785
LENED_011526
WD40 repeat-containing protein.
    
 0.785
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.