STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_006942AChain Crystal Structure Of Glutathione Transferase Gstfua3 From Phanerochaete Chrysosporium. (118 aa)    
Predicted Functional Partners:
LENED_001738
Serine arginine-rich splicing factor 4.
    
 0.711
LENED_004788
RNA-binding domain-containing protein.
    
 0.711
LENED_004787
RNA-binding domain-containing protein.
    
 0.711
LENED_007210
Isochorismatase hydrolase.
    
   0.606
LENED_009508
Pre-mRNA-splicing factor CEF1.
    
   0.606
LENED_005326
Rna-binding protein 39-like isoform 1.
    
 
 0.586
LENED_012832
U1 snRNP 70K protein.
    
 
 0.519
LENED_012831
U1 snRNP 70K protein.
    
 
 0.519
LENED_000995
Cleavage stimulation factor subunit 2.
    
 
 0.499
LENED_001489
R3h domain.
    
 
 0.499
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.