STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_006983Peptidyl-prolyl cis-trans isomerase. (119 aa)    
Predicted Functional Partners:
LENED_006856
Phosphatidylinositol phosphate kinase pipk5.
    
 0.782
LENED_000912
Nucleic acid-binding protein.
  
 
 0.773
LENED_006851
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.733
LENED_010142
Mitochondrial protein.
  
 
 0.712
LENED_006805
Peptidylprolyl isomerase.
   
 
 0.704
LENED_001951
Transcription elongation regulator.
    
 
 0.686
LENED_004507
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.684
LENED_008366
Molybdenum cofactor biosynthesis protein.
  
 
 0.664
LENED_008365
Molybdenum cofactor biosynthesis protein.
  
 
 0.664
LENED_009668
Phosphoprotein phosphatase.
   
 
 0.654
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.