STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_007141Trafficking protein particle complex subunit 2-like protein. (128 aa)    
Predicted Functional Partners:
LENED_006801
Transport protein particle component.
   
 0.995
LENED_002804
Trafficking protein particle complex subunit BET3.
    
 0.994
LENED_007032
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.993
LENED_012340
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.991
LENED_006861
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
   
 0.990
LENED_003491
Transport protein particle complex subunit.
    
 0.989
LENED_003974
Er to golgi transport-related protein.
    
 0.989
LENED_012569
Hypercellular protein.
    
 0.989
LENED_006422
Glutathione transferase omega-1.
    
 0.988
LENED_007922
Uncharacterized protein.
    
 0.988
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.