STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_007154Heavy metal translocatin. (649 aa)    
Predicted Functional Partners:
LENED_012560
Copper chaperone taha.
    
 0.955
LENED_005220
Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
  
0.610
LENED_000743
Calcium-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
 
0.602
LENED_000499
Laccase; Belongs to the multicopper oxidase family.
  
 
 0.588
LENED_000509
Cu-oxidase-domain-containing protein; Belongs to the multicopper oxidase family.
  
 
 0.588
LENED_001485
Transmembrane protein.
  
 
 0.588
LENED_002215
Laccase 6; Belongs to the multicopper oxidase family.
  
 
 0.588
LENED_002417
Laccase; Belongs to the multicopper oxidase family.
  
 
 0.588
LENED_004862
Laccase 2; Belongs to the multicopper oxidase family.
  
 
 0.588
LENED_004861
Laccase 2; Belongs to the multicopper oxidase family.
  
 
 0.588
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.