STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_007684Ste ste20 ysk protein kinase. (953 aa)    
Predicted Functional Partners:
LENED_004484
Mo25 protein.
    
 
 0.879
LENED_001486
WD40 repeat-like protein.
    
 
 0.828
LENED_008276
Leucine-rich repeat-containing protein sog2.
   
 
 0.822
LENED_008277
Leucine-rich repeat-containing protein sog2.
   
 
 0.822
LENED_007546
Mob1 phocein.
    
 
 0.794
LENED_000882
Cell cycle arrest in response to pheromone-related protein.
    
 
 0.790
LENED_005869
T-complex protein 1.
    
   0.763
LENED_000311
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
   0.757
LENED_005411
ARM repeat-containing protein.
   
 
 0.756
LENED_002754
T-complex protein 1 subunit delta.
    
   0.747
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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