STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_007868ATP synthase F1 alpha subunit. (364 aa)    
Predicted Functional Partners:
LENED_005065
ATP synthase subunit gamma.
 
 0.998
LENED_010958
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 0.998
LENED_010582
Mitochondrial atpase subunit.
   
 0.993
LENED_003406
Atp synthase subunit 5.
  
 0.992
LENED_006234
EF-hand domain-containing protein.
   
 0.992
LENED_004125
Epsilon subunit of F1F0-ATP synthase N-terminal domain-containing protein.
  
 0.987
LENED_002349
Jumonji superfamily protein.
  
 0.981
LENED_004128
Uncharacterized protein.
  
 0.981
LENED_012795
Mitochondrial atp synthase epsilon chain domain-containing protein.
   
 0.980
LENED_012898
Mitochondrial F1F0-ATP subunit G ATP20.
   
 0.976
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.