STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_007934Protein. (417 aa)    
Predicted Functional Partners:
LENED_005241
Serine/threonine-protein kinase.
    
 0.946
LENED_007935
Protein.
 
     0.918
LENED_001982
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.906
LENED_003816
TBC-domain-containing protein.
    
 0.901
LENED_012680
Serine threonine-protein kinase PLK4.
    
 0.883
LENED_009412
Antiviral helicase.
    
 
 0.840
LENED_009411
Antiviral helicase.
    
 
 0.840
LENED_001880
Non-specific serine/threonine protein kinase.
    
 
 0.692
LENED_010145
Phosphatases II.
    
 
 0.680
LENED_006321
TFP11-domain-containing protein.
   
   0.673
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.