STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_008305DUF1348-domain-containing protein. (156 aa)    
Predicted Functional Partners:
LENED_009436
Glycosyltransferase family 2 protein.
    
 0.944
LENED_003701
Calcium channel subunit cch1.
    
 0.935
LENED_002520
Nonmuscle myosin heavy chain b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.924
LENED_009396
Ras gtpase-activating protein.
    
 0.916
LENED_000429
Alpha beta-hydrolase; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.909
LENED_006805
Peptidylprolyl isomerase.
   
 0.905
LENED_001952
Cell division control protein.
   
 0.895
LENED_004897
Uncharacterized protein.
    
 0.874
LENED_007447
Uncharacterized protein.
    
 0.874
LENED_004573
Serine/threonine-protein phosphatase.
    
 0.868
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.