STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_008406NAD-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (369 aa)    
Predicted Functional Partners:
LENED_012190
Ferredoxin.
   
 0.688
LENED_007064
Peroxisomal hydratase-dehydrogenase-epimerase.
  
  0.594
LENED_004398
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.575
LENED_004020
Peroxisomal-enoyl-isomerase.
 
 
 0.566
LENED_007967
Acyl-binding protein.
   
 0.566
LENED_010029
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.566
LENED_003392
Rpel repeat protein.
   
 
  0.558
LENED_010444
Dihydrolipoyl dehydrogenase.
   
 0.544
LENED_004169
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.537
LENED_000910
Cyclin-dependent protein kinase inhibitor.
    
  0.535
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.