STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_008743Uncharacterized protein. (628 aa)    
Predicted Functional Partners:
LENED_012190
Ferredoxin.
   
 0.710
LENED_004243
Purine nucleotide binding protein.
    
 
 0.579
LENED_009287
Uncharacterized protein.
   
 
 0.573
LENED_007064
Peroxisomal hydratase-dehydrogenase-epimerase.
  
  0.567
LENED_008428
Sumo deconjugating cysteine peptidase ulp2.
    
 
 0.557
LENED_008427
Sumo deconjugating cysteine peptidase ulp2.
    
 
 0.557
LENED_012642
Sumo deconjugating cysteine peptidase ulp2.
    
 
 0.557
LENED_001715
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
   0.555
LENED_002092
BZIP domain-containing protein.
    
   0.555
LENED_002094
BZIP domain-containing protein.
    
   0.555
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
Server load: low (30%) [HD]