STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_008846Gpi transamidase component pig-s. (379 aa)    
Predicted Functional Partners:
LENED_001466
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 0.994
LENED_002796
Gaa1-domain-containing protein.
   
 0.994
LENED_006167
Gpi16 subunit GPI transamidase component.
   
 0.994
LENED_010777
PIG-U-domain-containing protein.
   
 0.984
LENED_011967
Phosphoethanolamine n-methyltransferase.
    
 0.914
LENED_002350
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 0.911
LENED_000349
Phosphatidylinositol-glycan biosynthesis class f.
     
 0.877
LENED_009102
3-ketodihydrosphingosine reductase tsc10.
     
 0.848
LENED_011727
Uncharacterized protein.
   
 0.605
LENED_003888
Phosphodiest-domain-containing protein.
    
 0.593
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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