STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_009417Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (124 aa)    
Predicted Functional Partners:
LENED_001004
Ubiquinol-cytochrome c reductase complex subunit 8.
   
 0.999
LENED_003583
Mitochondrial processing peptidase beta subunit; Belongs to the peptidase M16 family.
   
 0.999
LENED_005128
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.999
LENED_011974
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.999
LENED_012118
Ubiquinol-cytochrome c reductase complex core protein 2.
   
 0.999
LENED_003272
Cytochrome c oxidase polypeptide IV.
   
 0.998
LENED_007962
Mitochondrial cytochrome c oxidase subunit VIa; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.998
LENED_008190
QCR10 subunit of the ubiqunol-cytochrome c oxidoreductase complex.
   
 0.998
LENED_009845
Cytochrome-c oxidase chain vi.
   
 0.998
LENED_001571
Cytochrome c oxidase subunit v.
   
 0.997
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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