STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_009839Heme peroxidase. (1080 aa)    
Predicted Functional Partners:
LENED_012167
Lipoxygenase.
    
 0.633
LENED_008562
Aspartate aminotransferase.
    
 0.614
LENED_008027
Aspartate aminotransferase.
    
 0.601
LENED_011349
HSP20-like chaperone.
     
 0.594
LENED_012576
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
     
 0.565
LENED_011510
Glycoside hydrolase family 74 protein.
     
 0.553
LENED_002984
Transmembrane protein.
     
 0.493
LENED_005805
Meiotically up-regulated 190 protein.
     
 0.493
LENED_002883
Lysophospholipase.
     
 0.491
LENED_003374
Lysophospholipase.
     
 0.491
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.