STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_010116Eukaryotic translation initiation factor 4E class II; Belongs to the eukaryotic initiation factor 4E family. (602 aa)    
Predicted Functional Partners:
LENED_008018
Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.
  
  
0.907
LENED_010395
GYF domain-containing protein mpd2.
    
 
 0.870
LENED_002119
Eukaryotic initiation factor 4f subunit p130.
    
 0.805
LENED_002123
Eukaryotic initiation factor 4f subunit p130.
    
 0.805
LENED_012776
Eukaryotic initiation factor 4f subunit p130.
    
 0.805
LENED_005057
Uncharacterized protein.
    
 
 0.662
LENED_005398
Cerato-platanin 6.
    
 
 0.662
LENED_006881
Calcium activated cation channel.
    
 
 0.662
LENED_011552
Gyf domain protein.
    
 
 0.662
LENED_007494
RBR-type E3 ubiquitin transferase.
    
 0.631
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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