STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_011111Uncharacterized protein. (635 aa)    
Predicted Functional Partners:
LENED_001763
Ras-domain-containing protein.
   
 0.823
LENED_009013
Integral membrane protein sed5.
    
  0.760
LENED_011013
Spindle pole body component.
    
 
 0.726
LENED_004046
Microtubule associated protein.
   
 0.717
LENED_001538
Tubulin gamma chain; Belongs to the tubulin family.
    
 0.716
LENED_003577
Myosin 5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.707
LENED_008861
Myosin 5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.707
LENED_008324
General vesicular transport factor p115.
   
 0.699
LENED_010297
Regulator of G protein signaling superfamily.
    
 0.673
LENED_006010
Other wee protein kinase.
    
   0.665
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.