STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_011328Cytochrome p450. (424 aa)    
Predicted Functional Partners:
LENED_003629
Delta 5 fatty acid desaturase.
    
 0.715
LENED_010029
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.671
LENED_011802
Tryptophan synthase.
    
 0.651
LENED_008841
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
  0.618
LENED_012509
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
 
  
 0.597
LENED_004320
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
  0.594
LENED_000002
Cytochrome p450.
  
  
  0.582
LENED_000001
Cytochrome p450.
  
  
  0.582
LENED_002166
Cytochrome P450; Belongs to the cytochrome P450 family.
  
  
  0.577
LENED_011755
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.573
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.