STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_011395Uncharacterized protein. (351 aa)    
Predicted Functional Partners:
LENED_000764
Rna polymerase ii-associated protein.
   
 0.784
LENED_001841
Cell division control protein 16.
    
 0.777
LENED_011671
Rna polymerase-associated protein leo1.
    
 0.777
LENED_011962
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.775
LENED_008158
Anaphase-promoting complex subunit apc11.
    
 0.770
LENED_002635
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.766
LENED_001575
Fact complex subunit spt16.
    
 0.750
LENED_005422
ATP-dependent RNA helicase DRS1.
   
 0.740
LENED_009786
RPB5 subunit of DNA-directed RNA polymerase.
   
 0.740
LENED_005424
Anaphase-promoting complex component cut20 apc4.
   
 0.738
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.