STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_011573Transcription factor 25 (Basic helix-loop-helix). (2160 aa)    
Predicted Functional Partners:
LENED_011802
Tryptophan synthase.
  
 
 0.835
LENED_002847
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.824
LENED_010249
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.824
LENED_003028
Cysteine synthase A.
  
 0.786
LENED_003033
Cystathionine beta-synthase.
  
 0.786
LENED_010365
Uncharacterized protein.
  
 0.786
LENED_010084
Homocysteine S-methyltransferase.
  
 
 0.782
LENED_002599
PALP-domain-containing protein.
  
 0.771
LENED_002597
PALP-domain-containing protein.
  
 0.771
LENED_002598
PALP-domain-containing protein.
  
 0.771
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.