STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_012243Thiamine pyrophosphokinase. (229 aa)    
Predicted Functional Partners:
LENED_004837
Thiamin biosynthesis protein (Thi-4).
    
 0.821
LENED_001959
Adenylate cyclase.
    
 0.781
LENED_009505
Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
     
 0.747
LENED_008635
Aminophospholipid-transporting P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
     
 0.712
LENED_003448
Phosphoglycerate mutase-like protein; Belongs to the histidine acid phosphatase family.
     
 0.706
LENED_002325
Adenylate kinase; Belongs to the adenylate kinase family.
     
 0.702
LENED_012346
Adenylate kinase; Belongs to the adenylate kinase family.
     
 0.702
LENED_001497
Phosphoglycerate mutase-like protein; Belongs to the histidine acid phosphatase family.
     
 0.538
LENED_001498
Phosphoglycerate mutase-like protein; Belongs to the histidine acid phosphatase family.
     
 0.538
LENED_003570
Zinc phosphodiesterase ELAC protein 1.
    
  0.462
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.