STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_012563Uncharacterized protein. (2075 aa)    
Predicted Functional Partners:
LENED_006027
Jkappa-recombination signal binding protein.
    
  0.585
LENED_007956
Recombination signal binding protein for immunoglobulin kappa j region-like.
    
  0.585
LENED_011890
Mrna export receptor mex67.
    
  0.571
LENED_000396
Multidrug resistance protein.
    
  0.548
LENED_008172
Pre-mRNA-processing protein 45.
    
  0.531
LENED_010173
Chromo domain-containing protein required for cell polarity.
   
  0.530
LENED_011044
Coiled-coil protein.
  
 
  0.525
LENED_002351
14-3-3 protein; Belongs to the 14-3-3 family.
    
 0.516
LENED_007128
14-3-3 protein; Belongs to the 14-3-3 family.
    
  0.514
LENED_003508
Rna polymerase iii transcription factor.
    
  0.511
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.