STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_012655Malic enzyme. (543 aa)    
Predicted Functional Partners:
LENED_012225
Pyruvate carboxylase.
   
 0.944
LENED_003196
Malate dehydrogenase.
  
 0.936
LENED_011840
Malate dehydrogenase.
  
 0.936
LENED_009835
Mitochondrial pyruvate dehydrogenase E1 component beta subunit.
   
 0.932
LENED_009117
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 
 0.924
LENED_011061
Acetolactate synthase.
  
 
 0.915
LENED_002129
Mitochondrial cytochrome.
     
 0.901
LENED_011551
FAD-binding domain-containing protein.
   
 
 0.901
LENED_010473
Citrate synthase; Belongs to the citrate synthase family.
  
 0.897
LENED_012422
Peroxysomal citrate synthase.
  
 0.897
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.