Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LENED_001416 | LENED_006534 | A0A1Q3DYC7 | A0A1Q3EBX0 | Dna repair protein rad50. | Ribonuclease H-like protein. | 0.982 |
LENED_001416 | LENED_008841 | A0A1Q3DYC7 | A0A1Q3EI72 | Dna repair protein rad50. | Uncharacterized protein; Belongs to the cytochrome P450 family. | 0.502 |
LENED_001416 | LENED_010029 | A0A1Q3DYC7 | A0A1Q3ELE7 | Dna repair protein rad50. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.634 |
LENED_001416 | LENED_011755 | A0A1Q3DYC7 | A0A1Q3EQW3 | Dna repair protein rad50. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.999 |
LENED_001416 | LENED_012754 | A0A1Q3DYC7 | A0A1Q3ETJ2 | Dna repair protein rad50. | Cytochrome P450. | 0.570 |
LENED_001853 | LENED_008841 | A0A1Q3DZH8 | A0A1Q3EI72 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein; Belongs to the cytochrome P450 family. | 0.796 |
LENED_001853 | LENED_012754 | A0A1Q3DZH8 | A0A1Q3ETJ2 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Cytochrome P450. | 0.557 |
LENED_001853 | MED17 | A0A1Q3DZH8 | A0A1Q3EIT5 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.995 |
LENED_003629 | LENED_008841 | A0A1Q3E443 | A0A1Q3EI72 | Delta 5 fatty acid desaturase. | Uncharacterized protein; Belongs to the cytochrome P450 family. | 0.727 |
LENED_003629 | LENED_010029 | A0A1Q3E443 | A0A1Q3ELE7 | Delta 5 fatty acid desaturase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.478 |
LENED_003629 | LENED_011802 | A0A1Q3E443 | A0A1Q3ER25 | Delta 5 fatty acid desaturase. | Tryptophan synthase. | 0.739 |
LENED_003629 | LENED_012509 | A0A1Q3E443 | A0A1Q3ET43 | Delta 5 fatty acid desaturase. | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | 0.406 |
LENED_003629 | LENED_012754 | A0A1Q3E443 | A0A1Q3ETJ2 | Delta 5 fatty acid desaturase. | Cytochrome P450. | 0.715 |
LENED_006534 | LENED_001416 | A0A1Q3EBX0 | A0A1Q3DYC7 | Ribonuclease H-like protein. | Dna repair protein rad50. | 0.982 |
LENED_006534 | LENED_008841 | A0A1Q3EBX0 | A0A1Q3EI72 | Ribonuclease H-like protein. | Uncharacterized protein; Belongs to the cytochrome P450 family. | 0.543 |
LENED_006534 | LENED_010029 | A0A1Q3EBX0 | A0A1Q3ELE7 | Ribonuclease H-like protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.956 |
LENED_006534 | LENED_011755 | A0A1Q3EBX0 | A0A1Q3EQW3 | Ribonuclease H-like protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.994 |
LENED_006534 | LENED_012754 | A0A1Q3EBX0 | A0A1Q3ETJ2 | Ribonuclease H-like protein. | Cytochrome P450. | 0.566 |
LENED_008841 | LENED_001416 | A0A1Q3EI72 | A0A1Q3DYC7 | Uncharacterized protein; Belongs to the cytochrome P450 family. | Dna repair protein rad50. | 0.502 |
LENED_008841 | LENED_001853 | A0A1Q3EI72 | A0A1Q3DZH8 | Uncharacterized protein; Belongs to the cytochrome P450 family. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.796 |
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