STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_012833SH3-domain-containing protein. (236 aa)    
Predicted Functional Partners:
LENED_001286
Uncharacterized protein.
     
 0.951
LENED_004269
WH1-domain-containing partial.
    
 0.943
LENED_010314
TKL TKL-ccinprotein kinase.
    
 0.886
LENED_001437
Cell division control protein cdc25.
   
 0.865
LENED_006360
Cell division control protein.
   
 0.865
LENED_006690
Cell division control protein.
   
 0.865
LENED_006721
Uncharacterized protein.
   
 0.865
LENED_008528
Ras GEF.
   
 0.865
LENED_008738
Cell division control protein 25.
   
 0.865
LENED_010172
Uncharacterized protein.
    
 0.847
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.