STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGYG_02001U3 small nucleolar RNA-associated protein 18. (606 aa)    
Predicted Functional Partners:
MGYG_02866
DOM34-interacting protein 2.
   
 0.999
MGYG_02919
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
MGYG_03109
Ribosome biogenesis protein BMS1.
   
 0.999
MGYG_04186
Periodic tryptophan protein 2.
   
 0.999
MGYG_04534
Sas10/Utp3 family protein.
   
 0.999
MGYG_04686
U3 small nucleolar RNA-associated protein 13.
   
 0.999
MGYG_05696
U3 small nucleolar RNA-associated protein 15.
   
 0.999
MGYG_06896
U3 small nucleolar RNA-associated protein 5.
   
 0.999
MGYG_07489
U3 small nucleolar RNA-associated protein 4.
   
 0.999
MGYG_08531
U3 small nucleolar RNA-associated protein 21.
   
 0.999
Your Current Organism:
Nannizzia gypsea
NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893
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