STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGYG_02015Dienelactone hydrolase. (464 aa)    
Predicted Functional Partners:
MGYG_02248
Ribosome biogenesis protein TSR1.
   
  0.632
MGYG_08512
Uncharacterized protein.
   
  0.624
MGYG_03279
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.609
MGYG_07513
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.609
MGYG_03715
Low-temperature viability protein ltv1.
   
  0.607
MGYG_03889
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.606
MGYG_03553
Uncharacterized protein.
   
  0.605
MGYG_04767
Pre-rRNA-processing protein PNO1.
   
  0.605
MGYG_02955
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.604
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.604
Your Current Organism:
Nannizzia gypsea
NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.