STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGYG_04693RING finger domain-containing protein. (406 aa)    
Predicted Functional Partners:
MGYG_05607
Ubiquitin-conjugating enzyme E2 4; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.825
MGYG_04926
Ubiquitin-conjugating enzyme E2.
   
 0.825
MGYG_02584
Uncharacterized protein.
    
 0.807
MGYG_06919
Ubiquitin.
    
 0.807
MGYG_01878
BZIP domain-containing protein.
    
 0.807
MGYG_01295
Ubiquitin-like domain-containing protein.
    
 0.807
MGYG_06327
FACT complex subunit spt16.
    
 
 0.793
MGYG_00700
Autophagy-related protein.
   
 
 0.770
MGYG_03077
RRN7-type domain-containing protein.
    
  0.757
MGYG_03078
Ubiquitin-like domain-containing protein.
    
  0.757
Your Current Organism:
Nannizzia gypsea
NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.