STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGYG_06279Replication factor C subunit 4. (354 aa)    
Predicted Functional Partners:
MGYG_02355
Replication factor C subunit 5.
   
0.999
MGYG_02357
Replication factor C subunit 1.
   
0.999
MGYG_04080
Replication factor C protein subunit 3.
  
0.999
MGYG_05219
Cell cycle checkpoint protein RAD17.
    
 0.999
MGYG_06629
Replication factor C subunit 2.
  
0.999
MGYG_03974
DNA polymerase eta.
   
 0.992
MGYG_00285
Checkpoint protein; Belongs to the HUS1 family.
    
 0.991
MGYG_01303
DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.
   
 0.991
MGYG_02383
Chromosome transmission fidelity protein 18.
   
 0.987
MGYG_09167
AAA domain-containing protein.
   
 0.984
Your Current Organism:
Nannizzia gypsea
NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.