STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGYG_00501V-SNARE. (365 aa)    
Predicted Functional Partners:
MGYG_05411
V-SNARE.
    
 0.948
MGYG_08438
Synaptobrevin; Belongs to the synaptobrevin family.
     
 0.914
MGYG_06883
Vesicle transport V-SNARE protein vti1.
     
 0.772
MGYG_08096
Arf GTPase-activating protein.
  
  
  0.617
MGYG_08925
Uncharacterized protein.
   
 
  0.591
MGYG_04417
Synaptobrevin.
     
 0.589
MGYG_05501
PX domain-containing protein.
     
 0.547
MGYG_02623
Uncharacterized protein.
    
  0.496
MGYG_02736
Uncharacterized protein.
    
  0.496
MGYG_02816
PhoD_N domain-containing protein.
    
  0.496
Your Current Organism:
Nannizzia gypsea
NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.